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CELSR2 cadherin EGF LAG seven-pass G-type receptor 2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101371122, updated on 8-Mar-2024

Summary

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Gene symbol
CELSR2
Gene description
cadherin EGF LAG seven-pass G-type receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See CELSR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450591.1 (1614534..1639258, complement)

NW_004450591.1Genomic Context describing neighboring genes Neighboring gene myosin binding protein H like Neighboring gene proline and serine rich coiled-coil 1 Neighboring gene seryl-tRNA synthetase 1 Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450591.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin EGF LAG seven-pass G-type receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450591.1 Reference Oros_1.0 Primary Assembly

    Range
    1614534..1639258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004407194.1 → XP_004407251.1  cadherin EGF LAG seven-pass G-type receptor 2

    UniProtKB/TrEMBL
    A0A2U3WF63
    Conserved Domains (10) summary
    smart00303
    Location:2312 → 2365
    GPS; G-protein-coupled receptor proteolytic site domain
    cd11304
    Location:401 → 498
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00008
    Location:1969 → 2031
    HormR; Domain present in hormone receptors
    smart00180
    Location:1921 → 1966
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00054
    Location:1286 → 1321
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:1366 → 1549
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01500
    Location:1803 → 1953
    Keratin_B2; Keratin, high sulfur B2 protein
    pfam16489
    Location:2049 → 2284
    GAIN; GPCR-Autoproteolysis INducing (GAIN) domain
    cl19567
    Location:1816 → 1863
    DSL; Delta serrate ligand
    cl21561
    Location:2399 → 2602
    7tm_4; Olfactory receptor
Nucleotide Protein
Heading Accession and Version

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