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GABARAPL1 GABA type A receptor associated protein like 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101367890, updated on 8-Mar-2024

Summary

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Gene symbol
GABARAPL1
Gene description
GABA type A receptor associated protein like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450917.1 (173558..182867, complement)

NW_004450917.1Genomic Context describing neighboring genes Neighboring gene killer cell lectin like receptor K1 Neighboring gene killer cell lectin like receptor D1 Neighboring gene transmembrane protein 52B Neighboring gene oxidized low density lipoprotein receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450917.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-aminobutyric acid receptor-associated protein-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450917.1 Reference Oros_1.0 Primary Assembly

    Range
    173558..182867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004412638.2 → XP_004412695.1  gamma-aminobutyric acid receptor-associated protein-like 1

    See identical proteins and their annotated locations for XP_004412695.1

    UniProtKB/TrEMBL
    A0A2U3WTH7
    Conserved Domains (1) summary
    cd16127
    Location:5 → 111
    Ubl_ATG8_GABARAP_like; ubiquitin-like (Ubl) domain found in gamma-aminobutyric acid receptor-associated protein (GABARAP) and similar proteins; sub-family of the autophagy-related 8 (ATG8) protein family
Nucleotide Protein
Heading Accession and Version

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