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SEPTIN6 septin 6 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101367766, updated on 8-Mar-2024

Summary

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Gene symbol
SEPTIN6
Gene description
septin 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Also known as
SEPT6
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450502.1 (288379..354194)

NW_004450502.1Genomic Context describing neighboring genes Neighboring gene sosondowah ankyrin repeat domain family member D Neighboring gene securin-like Neighboring gene NFKB repressing factor Neighboring gene ubiquitin conjugating enzyme E2 A Neighboring gene ras-related protein Rab-9A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450502.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450502.1 Reference Oros_1.0 Primary Assembly

    Range
    288379..354194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004405221.2 → XP_004405278.1  septin-6 isoform X5

    See identical proteins and their annotated locations for XP_004405278.1

    UniProtKB/TrEMBL
    A0A2U3WAA6
    Conserved Domains (1) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family

  2. XM_004405222.1 → XP_004405279.1  septin-6 isoform X5

    See identical proteins and their annotated locations for XP_004405279.1

    UniProtKB/TrEMBL
    A0A2U3WAA6
    Conserved Domains (1) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family

  3. XM_004405218.2 → XP_004405275.1  septin-6 isoform X4

    See identical proteins and their annotated locations for XP_004405275.1

    UniProtKB/TrEMBL
    A0A2U3WA97
    Conserved Domains (1) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family

  4. XM_004405220.2 → XP_004405277.1  septin-6 isoform X5

    See identical proteins and their annotated locations for XP_004405277.1

    UniProtKB/TrEMBL
    A0A2U3WAA6
    Conserved Domains (1) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family

  5. XM_004405217.2 → XP_004405274.1  septin-6 isoform X2

    UniProtKB/TrEMBL
    A0A2U3WAA7
    Conserved Domains (2) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:21 → 373
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  6. XM_004405219.2 → XP_004405276.1  septin-6 isoform X5

    See identical proteins and their annotated locations for XP_004405276.1

    UniProtKB/TrEMBL
    A0A2U3WAA6
    Conserved Domains (1) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family

  7. XM_012564042.1 → XP_012419496.1  septin-6 isoform X1

    Conserved Domains (2) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:21 → 373
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  8. XM_012564043.1 → XP_012419497.1  septin-6 isoform X3

    Conserved Domains (1) summary
    cd01850
    Location:49 → 317
    CDC_Septin; CDC/Septin GTPase family
Nucleotide Protein
Heading Accession and Version

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