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PSD3 pleckstrin and Sec7 domain containing 3 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101339914, updated on 8-Mar-2024

Summary

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Gene symbol
PSD3
Gene description
pleckstrin and Sec7 domain containing 3
See related
EnsemblRapid:ENSTTRG00000013938
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
18
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 21 NC_047054.1 (34165271..34735312)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844527.1 (32544144..32999249)

Chromosome 21 - NC_047054.1Genomic Context describing neighboring genes Neighboring gene SH2 domain containing 4A Neighboring gene uncharacterized LOC117310038 Neighboring gene protein phosphatase 1F-like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene small nucleolar RNA SNORA70 Neighboring gene arylamine N-acetyltransferase 1 Neighboring gene protocadherin beta-2 Neighboring gene uncharacterized LOC117310033

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH and SEC7 domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047054.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    34165271..34735312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033848747.1 → XP_033704638.1  PH and SEC7 domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A6J3QRJ1
    Related
    ENSTTRP00000025417.1, ENSTTRT00000038838.1
    Conserved Domains (3) summary
    PHA03307
    Location:37 → 237
    PHA03307; transcriptional regulator ICP4; Provisional
    cd00171
    Location:812 → 966
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:1011 → 1136
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  2. XM_019921549.2 → XP_019777108.1  PH and SEC7 domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A2U4A7Y8
    Related
    ENSTTRP00000016797.1, ENSTTRT00000027537.1
    Conserved Domains (2) summary
    cd00171
    Location:580 → 734
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:779 → 904
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

  3. XM_033848748.1 → XP_033704639.1  PH and SEC7 domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A6J3QR34
    Related
    ENSTTRP00000018818.1, ENSTTRT00000035372.1
    Conserved Domains (2) summary
    cd00171
    Location:40 → 194
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:239 → 364
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
Nucleotide Protein
Heading Accession and Version

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