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USP25 ubiquitin specific peptidase 25 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101335096, updated on 8-Mar-2024

Summary

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Gene symbol
USP25
Gene description
ubiquitin specific peptidase 25
See related
EnsemblRapid:ENSTTRG00000015571
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
27
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 4 NC_047037.1 (116343905..116483157)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844625.1 (25584431..25722540, complement)

Chromosome 4 - NC_047037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109547933 Neighboring gene 40S ribosomal protein SA-like Neighboring gene protein SET-like Neighboring gene uncharacterized LOC109547828

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047037.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    116343905..116483157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019922542.2 → XP_019778101.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X1

    UniProtKB/TrEMBL
    A0A2U4AB23
    Related
    ENSTTRP00000031850.1, ENSTTRT00000027277.1
    Conserved Domains (3) summary
    cd02665
    Location:170 → 655
    Peptidase_C19I; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cd14354
    Location:15 → 60
    UBA_UBP25; UBA domain found in ubiquitin carboxyl-terminal hydrolase 25 (UBP25) and similar proteins
    cl02553
    Location:168 → 298
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  2. XM_019922544.2 → XP_019778103.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X5

    UniProtKB/TrEMBL
    A0A2U4AAQ4
    Related
    ENSTTRP00000032748.1, ENSTTRT00000031114.1
    Conserved Domains (3) summary
    cd02665
    Location:170 → 655
    Peptidase_C19I; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cd14354
    Location:15 → 60
    UBA_UBP25; UBA domain found in ubiquitin carboxyl-terminal hydrolase 25 (UBP25) and similar proteins
    cl02553
    Location:168 → 298
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  3. XM_019922543.2 → XP_019778102.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X2

    UniProtKB/TrEMBL
    A0A2U4AAU2
    Conserved Domains (3) summary
    cd02665
    Location:170 → 655
    Peptidase_C19I; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cd14354
    Location:15 → 60
    UBA_UBP25; UBA domain found in ubiquitin carboxyl-terminal hydrolase 25 (UBP25) and similar proteins
    cl02553
    Location:168 → 298
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  4. XM_033855978.1 → XP_033711869.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X4

    UniProtKB/TrEMBL
    A0A6J3RBJ3
    Conserved Domains (2) summary
    cd02665
    Location:1 → 361
    Peptidase_C19I; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cd20486
    Location:473 → 753
    USP25_C; carboxyl-terminal domain of ubiquitin-specific protease 25 (USP25)

  5. XM_033855977.1 → XP_033711868.1  ubiquitin carboxyl-terminal hydrolase 25 isoform X3

    UniProtKB/TrEMBL
    A0A6J3RD91
    Conserved Domains (2) summary
    cd02665
    Location:1 → 337
    Peptidase_C19I; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cd20486
    Location:449 → 729
    USP25_C; carboxyl-terminal domain of ubiquitin-specific protease 25 (USP25)
Nucleotide Protein
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