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UBE3C ubiquitin protein ligase E3C [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101334428, updated on 8-Mar-2024

Summary

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Gene symbol
UBE3C
Gene description
ubiquitin protein ligase E3C
See related
EnsemblRapid:ENSTTRG00000000515
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
24
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 9 NC_047042.1 (103937743..104055416)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017842806.1 (1154677..1266672, complement)

Chromosome 9 - NC_047042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109549171 Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene uncharacterized LOC109549168 Neighboring gene uncharacterized LOC109549169

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-protein ligase E3C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047042.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    103937743..104055416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033863557.1 → XP_033719448.1  ubiquitin-protein ligase E3C isoform X3

    UniProtKB/TrEMBL
    A0A6J3RY39
    Conserved Domains (2) summary
    smart00015
    Location:38 → 55
    IQ; Calmodulin-binding motif
    cd00078
    Location:717 → 1073
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  2. XM_004317443.3 → XP_004317491.1  ubiquitin-protein ligase E3C isoform X1

    UniProtKB/TrEMBL
    A0A2U3V2P6
    Related
    ENSTTRP00000000482.2, ENSTTRT00000000514.2
    Conserved Domains (2) summary
    smart00015
    Location:47 → 64
    IQ; Calmodulin-binding motif
    cd00078
    Location:726 → 1082
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  3. XM_019930243.2 → XP_019785802.1  ubiquitin-protein ligase E3C isoform X4

    UniProtKB/TrEMBL
    A0A2U4AXW6
    Conserved Domains (2) summary
    smart00015
    Location:47 → 64
    IQ; Calmodulin-binding motif
    cd00078
    Location:726 → 1067
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  4. XM_019930242.2 → XP_019785801.1  ubiquitin-protein ligase E3C isoform X2

    UniProtKB/TrEMBL
    A0A2U4AXY5
    Conserved Domains (2) summary
    smart00015
    Location:47 → 64
    IQ; Calmodulin-binding motif
    cd00078
    Location:725 → 1081
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  5. XM_019930244.2 → XP_019785803.1  ubiquitin-protein ligase E3C isoform X5

    UniProtKB/TrEMBL
    A0A2U4AXW4
    Conserved Domains (2) summary
    smart00015
    Location:47 → 64
    IQ; Calmodulin-binding motif
    cd00078
    Location:710 → 1066
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  6. XM_019930245.2 → XP_019785804.1  ubiquitin-protein ligase E3C isoform X6

    UniProtKB/TrEMBL
    A0A2U4AYB5
    Conserved Domains (2) summary
    smart00015
    Location:47 → 64
    IQ; Calmodulin-binding motif
    cd00078
    Location:693 → 1049
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

  7. XM_019930246.2 → XP_019785805.1  ubiquitin-protein ligase E3C isoform X7

    UniProtKB/TrEMBL
    A0A2U4AXV2
    Conserved Domains (1) summary
    cd00078
    Location:580 → 936
    HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
Nucleotide Protein
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