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ATRX ATRX chromatin remodeler [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101327673, updated on 8-Mar-2024

Summary

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Gene symbol
ATRX
Gene description
ATRX chromatin remodeler
See related
EnsemblRapid:ENSTTRG00000004342
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
38
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) X NC_047055.1 (65563700..65812411)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017842989.1 (3444242..3668523, complement)

Chromosome X - NC_047055.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial Neighboring gene general transcription factor IIE subunit 2-like Neighboring gene magnesium transporter 1 Neighboring gene 60S ribosomal protein L10-like Neighboring gene fibroblast growth factor 16 Neighboring gene trafficking protein particle complex subunit 13-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: transcriptional regulator ATRX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047055.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    65563700..65812411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019932170.2 → XP_019787729.1  LOW QUALITY PROTEIN: transcriptional regulator ATRX

    UniProtKB/TrEMBL
    A0A2U4B3S8
    Related
    ENSTTRP00000004116.2, ENSTTRT00000004372.2
    Conserved Domains (4) summary
    cd00079
    Location:2020 → 2166
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd11726
    Location:173 → 276
    ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
    pfam00176
    Location:1565 → 1891
    SNF2_N; SNF2 family N-terminal domain
    cl25574
    Location:883 → 1134
    TOP2c; TopoisomeraseII
Nucleotide Protein
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