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RPS21 ribosomal protein S21 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101322759, updated on 8-Mar-2024

Summary

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Gene symbol
RPS21
Gene description
ribosomal protein S21
See related
EnsemblRapid:ENSTTRG00000011105
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 15 NC_047048.1 (84976993..84978313)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017843746.1 (98452..99757, complement)

Chromosome 15 - NC_047048.1Genomic Context describing neighboring genes Neighboring gene ADRM1 26S proteasome ubiquitin receptor Neighboring gene laminin subunit alpha 5 Neighboring gene Cdk5 and Abl enzyme substrate 2 Neighboring gene GATA binding protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047048.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    84976993..84978313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033841211.1 → XP_033697102.1  40S ribosomal protein S21 isoform X2

    UniProtKB/TrEMBL
    A0A6J3Q4H6
    Conserved Domains (1) summary
    pfam01249
    Location:1 → 62
    Ribosomal_S21e; Ribosomal protein S21e

  2. XM_019943977.2 → XP_019799536.1  40S ribosomal protein S21 isoform X1

    UniProtKB/TrEMBL
    A0A2U4C2D3
    Related
    ENSTTRP00000010530.2, ENSTTRT00000011105.2
    Conserved Domains (1) summary
    pfam01249
    Location:1 → 80
    Ribosomal_S21e; Ribosomal protein S21e
Nucleotide Protein
Heading Accession and Version

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