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SATB2 SATB homeobox 2 [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101318672, updated on 8-Mar-2024

Summary

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Gene symbol
SATB2
Gene description
SATB homeobox 2
See related
EnsemblRapid:ENSTTRG00000001254
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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See SATB2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 7 NC_047040.1 (35765168..35956484)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017843453.1 (16432210..16618306)

Chromosome 7 - NC_047040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109550566 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein SATB2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047040.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    35765168..35956484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033859920.1 → XP_033715811.1  DNA-binding protein SATB2

    UniProtKB/TrEMBL
    A0A2U4BNH0
    Related
    ENSTTRP00000001178.2, ENSTTRT00000001253.2
    Conserved Domains (4) summary
    smart00389
    Location:614 → 671
    HOX; Homeodomain
    cd11585
    Location:60 → 155
    SATB1_N; N-terminal domain of SATB1 and similar proteins
    pfam02376
    Location:477 → 556
    CUT; CUT domain
    pfam16557
    Location:162 → 232
    CUTL; CUT1-like DNA-binding domain of SATB

  2. XM_019939203.2 → XP_019794762.1  DNA-binding protein SATB2

    UniProtKB/TrEMBL
    A0A2U4BNH0
    Conserved Domains (4) summary
    smart00389
    Location:614 → 671
    HOX; Homeodomain
    cd11585
    Location:60 → 155
    SATB1_N; N-terminal domain of SATB1 and similar proteins
    pfam02376
    Location:477 → 556
    CUT; CUT domain
    pfam16557
    Location:162 → 232
    CUTL; CUT1-like DNA-binding domain of SATB

  3. XM_033859919.1 → XP_033715810.1  DNA-binding protein SATB2

    UniProtKB/TrEMBL
    A0A2U4BNH0
    Conserved Domains (4) summary
    smart00389
    Location:614 → 671
    HOX; Homeodomain
    cd11585
    Location:60 → 155
    SATB1_N; N-terminal domain of SATB1 and similar proteins
    pfam02376
    Location:477 → 556
    CUT; CUT domain
    pfam16557
    Location:162 → 232
    CUTL; CUT1-like DNA-binding domain of SATB
Nucleotide Protein
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