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PLAGL1 PLAG1 like zinc finger 1 [ Orcinus orca (killer whale) ]

Gene ID: 101289767, updated on 8-Mar-2024

Summary

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Gene symbol
PLAGL1
Gene description
PLAG1 like zinc finger 1
See related
EnsemblRapid:ENSOORG00010009715
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 12 NC_064570.1 (20511140..20611145)

Chromosome 12 - NC_064570.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L4-like Neighboring gene translation initiation factor IF-2-like Neighboring gene splicing factor 3b subunit 5 Neighboring gene zinc finger C2HC-type containing 1B Neighboring gene phosphatase and actin regulator 2 Neighboring gene LTV1 ribosome biogenesis factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064570.1 Chromosome 12 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein PLAGL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064570.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    20511140..20611145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033405808.2 → XP_033261699.1  zinc finger protein PLAGL1 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:29 → 109
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:6 → 26
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:49 → 73
    zf-H2C2_2; Zinc-finger double domain

  2. XM_033405824.2 → XP_033261715.1  zinc finger protein PLAGL1 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:29 → 109
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:6 → 26
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:49 → 73
    zf-H2C2_2; Zinc-finger double domain

  3. XM_033405810.2 → XP_033261701.1  zinc finger protein PLAGL1 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:29 → 109
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:6 → 26
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:49 → 73
    zf-H2C2_2; Zinc-finger double domain

  4. XM_012536857.3 → XP_012392311.1  zinc finger protein PLAGL1 isoform X2

    See identical proteins and their annotated locations for XP_012392311.1

    Conserved Domains (3) summary
    COG5236
    Location:28 → 155
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:70 → 90
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  5. XM_033405840.2 → XP_033261731.1  zinc finger protein PLAGL1 isoform X2

    Conserved Domains (3) summary
    COG5236
    Location:28 → 155
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:70 → 90
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  6. XM_033405830.2 → XP_033261721.1  zinc finger protein PLAGL1 isoform X2

    Conserved Domains (3) summary
    COG5236
    Location:28 → 155
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:70 → 90
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  7. XM_033405811.2 → XP_033261702.1  zinc finger protein PLAGL1 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:29 → 109
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:6 → 26
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:49 → 73
    zf-H2C2_2; Zinc-finger double domain

  8. XM_033405814.2 → XP_033261705.1  zinc finger protein PLAGL1 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:29 → 109
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:6 → 26
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:49 → 73
    zf-H2C2_2; Zinc-finger double domain

  9. XM_033405805.2 → XP_033261696.1  zinc finger protein PLAGL1 isoform X1

    Conserved Domains (3) summary
    COG5189
    Location:29 → 109
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:6 → 26
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:49 → 73
    zf-H2C2_2; Zinc-finger double domain

  10. XM_049695599.1 → XP_049551556.1  zinc finger protein PLAGL1 isoform X1

    Related
    ENSOORP00010012079.1, ENSOORT00010014253.1

  11. XM_033405841.2 → XP_033261732.1  zinc finger protein PLAGL1 isoform X2

    Conserved Domains (3) summary
    COG5236
    Location:28 → 155
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:70 → 90
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  12. XM_033405848.2 → XP_033261739.1  zinc finger protein PLAGL1 isoform X2

    Conserved Domains (3) summary
    COG5236
    Location:28 → 155
    COG5236; Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
    sd00017
    Location:70 → 90
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type
Nucleotide Protein
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