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AFG1L AFG1 like ATPase [ Orcinus orca (killer whale) ]

Gene ID: 101288622, updated on 8-Mar-2024

Summary

Gene symbol
AFG1L
Gene description
AFG1 like ATPase
See related
EnsemblRapid:ENSOORG00010004426
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Also known as
LACE1
Orthologs
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Genomic context

Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 12 NC_064570.1 (50139441..50354082, complement)

Chromosome 12 - NC_064570.1Genomic Context describing neighboring genes Neighboring gene sestrin 1 Neighboring gene armadillo repeat containing 2 Neighboring gene forkhead box O3 Neighboring gene 60S ribosomal protein L36a-like Neighboring gene sorting nexin 3 Neighboring gene nuclear receptor subfamily 2 group E member 1 Neighboring gene U6 spliceosomal RNA Neighboring gene osteoclastogenesis associated transmembrane protein 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_064570.1 Chromosome 12 Reference mOrcOrc1.1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
AFG1-like ATPase
Names
lactation elevated 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064570.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    50139441..50354082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049695305.1XP_049551262.1  AFG1-like ATPase isoform X6

  2. XM_033418719.2XP_033274610.1  AFG1-like ATPase isoform X7

    Conserved Domains (1) summary
    cl38936
    Location:72375
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  3. XM_049695303.1XP_049551260.1  AFG1-like ATPase isoform X1

  4. XM_033418716.2XP_033274607.1  AFG1-like ATPase isoform X2

    Conserved Domains (1) summary
    COG1485
    Location:72447
    YhcM; Predicted ATPase [General function prediction only]
  5. XM_049695304.1XP_049551261.1  AFG1-like ATPase isoform X5

  6. XM_033418717.2XP_033274608.1  AFG1-like ATPase isoform X3

    Conserved Domains (1) summary
    COG1485
    Location:72435
    YhcM; Predicted ATPase [General function prediction only]
  7. XM_033418720.2XP_033274611.1  AFG1-like ATPase isoform X9

    Conserved Domains (1) summary
    cl38936
    Location:72424
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  8. XM_033418718.2XP_033274609.1  AFG1-like ATPase isoform X4

    Conserved Domains (1) summary
    COG1485
    Location:72415
    YhcM; Predicted ATPase [General function prediction only]
  9. XM_004264749.4XP_004264797.1  AFG1-like ATPase isoform X8

    Related
    ENSOORP00010005151.1, ENSOORT00010006384.1
    Conserved Domains (2) summary
    COG1485
    Location:72471
    YhcM; Predicted ATPase [General function prediction only]
    cl21455
    Location:74471
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases