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TBC1D4 TBC1 domain family member 4 [ Orcinus orca (killer whale) ]

Gene ID: 101287854, updated on 8-Mar-2024

Summary

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Gene symbol
TBC1D4
Gene description
TBC1 domain family member 4
See related
EnsemblRapid:ENSOORG00010003208
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 18 NC_064576.1 (29879794..30102838)

Chromosome 18 - NC_064576.1Genomic Context describing neighboring genes Neighboring gene MORF4 family-associated protein 1-like Neighboring gene COMM domain containing 6 Neighboring gene protein SET-like Neighboring gene KLF transcription factor 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064576.1 Chromosome 18 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
TBC1 domain family member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064576.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    29879794..30102838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049700961.1 → XP_049556918.1  TBC1 domain family member 4 isoform X1

    Related
    ENSOORP00010003503.1, ENSOORT00010004522.1

  2. XM_004284276.3 → XP_004284324.1  TBC1 domain family member 4 isoform X2

    Related
    ENSOORP00010003504.1, ENSOORT00010004523.1
    Conserved Domains (5) summary
    smart00164
    Location:857 → 1071
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    smart00462
    Location:31 → 190
    PTB; Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain
    cd01269
    Location:193 → 439
    PTB_TBC1D1_like; TBC1 domain family member 1 and related proteins Phosphotyrosine-binding (PTB) domain
    pfam11830
    Location:751 → 803
    DUF3350; Domain of unknown function (DUF3350)
    pfam13094
    Location:1138 → 1236
    CENP-Q; CENP-Q, a CENPA-CAD centromere complex subunit

  3. XM_033414027.2 → XP_033269918.1  TBC1 domain family member 4 isoform X3

    Conserved Domains (1) summary
    smart00164
    Location:62 → 276
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
Nucleotide Protein
Heading Accession and Version

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