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GPT2 glutamic--pyruvic transaminase 2 [ Orcinus orca (killer whale) ]

Gene ID: 101287779, updated on 8-Mar-2024

Summary

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Gene symbol
GPT2
Gene description
glutamic--pyruvic transaminase 2
See related
EnsemblRapid:ENSOORG00010004814
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 20 NC_064578.1 (36660976..36696559, complement)

Chromosome 20 - NC_064578.1Genomic Context describing neighboring genes Neighboring gene neuropilin and tolloid like 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member A2 Neighboring gene uncharacterized LOC125962737 Neighboring gene UPF0547 protein C16orf87-like Neighboring gene small nucleolar RNA SNORA11 Neighboring gene UPF0547 protein C16orf87 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064578.1 Chromosome 20 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine aminotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064578.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    36660976..36696559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004264867.4 → XP_004264915.1  alanine aminotransferase 2

    Related
    ENSOORP00010005519.1, ENSOORT00010006867.1
    Conserved Domains (2) summary
    cd00609
    Location:125 → 513
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:48 → 523
    PTZ00377; alanine aminotransferase; Provisional

RNA

  1. XR_004480656.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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