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ZBED6 zinc finger BED-type containing 6 [ Orcinus orca (killer whale) ]

Gene ID: 101285640, updated on 8-Mar-2024

Summary

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Gene symbol
ZBED6
Gene description
zinc finger BED-type containing 6
See related
EnsemblRapid:ENSOORG00010016917
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 1 NC_064559.1 (33931677..33942711)

Chromosome 1 - NC_064559.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117197687 Neighboring gene opticin Neighboring gene ATPase plasma membrane Ca2+ transporting 4 Neighboring gene zinc finger CCCH-type containing 11A Neighboring gene 40S ribosomal protein S15-like Neighboring gene small nuclear ribonucleoprotein polypeptide E

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064559.1 Chromosome 1 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger BED domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064559.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    33931677..33942711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049696594.1 → XP_049552551.1  zinc finger BED domain-containing protein 6

  2. XM_004282479.4 → XP_004282527.1  zinc finger BED domain-containing protein 6

    Related
    ENSOORP00010022154.1, ENSOORT00010025229.1
    Conserved Domains (2) summary
    smart00614
    Location:134 → 181
    ZnF_BED; BED zinc finger
    pfam05699
    Location:870 → 950
    Dimer_Tnp_hAT; hAT family C-terminal dimerization region
Nucleotide Protein
Heading Accession and Version

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