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B4GALT2 beta-1,4-galactosyltransferase 2 [ Orcinus orca (killer whale) ]

Gene ID: 101285582, updated on 8-Mar-2024

Summary

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Gene symbol
B4GALT2
Gene description
beta-1,4-galactosyltransferase 2
See related
EnsemblRapid:ENSOORG00010021352
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 1 NC_064559.1 (176814997..176825171, complement)

Chromosome 1 - NC_064559.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125961129 Neighboring gene solute carrier family 6 member 9 Neighboring gene coiled-coil domain containing 24 Neighboring gene ATPase H+ transporting V0 subunit b Neighboring gene diphthamide biosynthesis 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064559.1 Chromosome 1 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064559.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    176814997..176825171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049694067.1 → XP_049550024.1  beta-1,4-galactosyltransferase 2 isoform X4

  2. XM_049694064.1 → XP_049550021.1  beta-1,4-galactosyltransferase 2 isoform X3

  3. XM_049694043.1 → XP_049550000.1  beta-1,4-galactosyltransferase 2 isoform X1

  4. XM_004266314.4 → XP_004266362.1  beta-1,4-galactosyltransferase 2 isoform X3

    See identical proteins and their annotated locations for XP_004266362.1

    Conserved Domains (2) summary
    cd00899
    Location:142 → 358
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    PHA03247
    Location:50 → 99
    PHA03247; large tegument protein UL36; Provisional

  5. XM_049694069.1 → XP_049550026.1  beta-1,4-galactosyltransferase 2 isoform X3

  6. XM_033421893.2 → XP_033277784.1  beta-1,4-galactosyltransferase 2 isoform X1

    Conserved Domains (2) summary
    cd00899
    Location:177 → 393
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    PHA03247
    Location:85 → 134
    PHA03247; large tegument protein UL36; Provisional

  7. XM_049694057.1 → XP_049550014.1  beta-1,4-galactosyltransferase 2 isoform X1

    Related
    ENSOORP00010028348.1, ENSOORT00010032002.1

  8. XM_049694062.1 → XP_049550019.1  beta-1,4-galactosyltransferase 2 isoform X2

RNA

  1. XR_007470003.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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