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TRIM42 tripartite motif containing 42 [ Orcinus orca (killer whale) ]

Gene ID: 101285543, updated on 8-Mar-2024

Summary

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Gene symbol
TRIM42
Gene description
tripartite motif containing 42
See related
EnsemblRapid:ENSOORG00010011743
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 5 NC_064563.1 (28323156..28352777, complement)

Chromosome 5 - NC_064563.1Genomic Context describing neighboring genes Neighboring gene CDGSH iron-sulfur domain-containing protein 1-like Neighboring gene eukaryotic translation initiation factor 3 subunit J-like Neighboring gene calsyntenin 2 Neighboring gene uncharacterized LOC125964428

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064563.1 Chromosome 5 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tripartite motif-containing protein 42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064563.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    28323156..28352777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004278976.3 → XP_004279024.2  tripartite motif-containing protein 42

    Related
    ENSOORP00010014890.1, ENSOORT00010017310.1
Nucleotide Protein
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Gene LinkOut

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