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DPPA2 developmental pluripotency associated 2 [ Orcinus orca (killer whale) ]

Gene ID: 101285268, updated on 8-Mar-2024

Summary

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Gene symbol
DPPA2
Gene description
developmental pluripotency associated 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 5 NC_064563.1 (93135334..93154725)

Chromosome 5 - NC_064563.1Genomic Context describing neighboring genes Neighboring gene inosine-5'-monophosphate dehydrogenase 1-like Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene developmental pluripotency associated 4 Neighboring gene MORC family CW-type zinc finger 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064563.1 Chromosome 5 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
developmental pluripotency-associated protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064563.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    93135334..93154725
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033432240.1 → XP_033288131.1  developmental pluripotency-associated protein 2

    Conserved Domains (3) summary
    pfam14047
    Location:321 → 387
    DCR; Dppa2/4 conserved region
    pfam14049
    Location:233 → 316
    Dppa2_A; Dppa2/4 conserved region in higher vertebrates
    cl02640
    Location:201 → 227
    SAP; SAP domain
Nucleotide Protein
Heading Accession and Version

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