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PRICKLE3 prickle planar cell polarity protein 3 [ Orcinus orca (killer whale) ]

Gene ID: 101282020, updated on 8-Mar-2024

Summary

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Gene symbol
PRICKLE3
Gene description
prickle planar cell polarity protein 3
See related
EnsemblRapid:ENSOORG00010018850
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) X NC_064580.1 (43971116..43979778, complement)

Chromosome X - NC_064580.1Genomic Context describing neighboring genes Neighboring gene MAGI family member, X-linked Neighboring gene proteolipid protein 2 Neighboring gene synaptophysin Neighboring gene calcium voltage-gated channel subunit alpha1 F

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064580.1 Chromosome X Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prickle planar cell polarity protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064580.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    43971116..43979778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004281932.3 → XP_004281980.1  prickle planar cell polarity protein 3 isoform X2

    Related
    ENSOORP00010024824.1, ENSOORT00010028209.1
    Conserved Domains (4) summary
    cd09415
    Location:186 → 244
    LIM1_Prickle; The first LIM domain of Prickle
    cd09418
    Location:249 → 304
    LIM2_Prickle; The second LIM domain of Prickle
    cd09420
    Location:309 → 367
    LIM3_Prickle; The third LIM domain of Prickle
    cd09827
    Location:82 → 178
    PET_Prickle; The PET domain of Prickle

  2. XM_033409706.2 → XP_033265597.1  prickle planar cell polarity protein 3 isoform X1

    Conserved Domains (4) summary
    cd09415
    Location:210 → 268
    LIM1_Prickle; The first LIM domain of Prickle
    cd09418
    Location:273 → 328
    LIM2_Prickle; The second LIM domain of Prickle
    cd09420
    Location:333 → 391
    LIM3_Prickle; The third LIM domain of Prickle
    cd09827
    Location:106 → 202
    PET_Prickle; The PET domain of Prickle

  3. XM_033409707.2 → XP_033265598.1  prickle planar cell polarity protein 3 isoform X3

    Conserved Domains (4) summary
    cd09415
    Location:118 → 176
    LIM1_Prickle; The first LIM domain of Prickle
    cd09418
    Location:181 → 236
    LIM2_Prickle; The second LIM domain of Prickle
    cd09420
    Location:241 → 299
    LIM3_Prickle; The third LIM domain of Prickle
    cd09827
    Location:14 → 110
    PET_Prickle; The PET domain of Prickle
Nucleotide Protein
Heading Accession and Version

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