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CRNKL1 crooked neck pre-mRNA splicing factor 1 [ Orcinus orca (killer whale) ]

Gene ID: 101281895, updated on 8-Mar-2024

Summary

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Gene symbol
CRNKL1
Gene description
crooked neck pre-mRNA splicing factor 1
See related
EnsemblRapid:ENSOORG00010010797
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 16 NC_064574.1 (46939421..46962474)

Chromosome 16 - NC_064574.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 61 Neighboring gene bladder cancer-associated protein-like Neighboring gene 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like Neighboring gene uncharacterized LOC125961391 Neighboring gene N-alpha-acetyltransferase 20, NatB catalytic subunit Neighboring gene uncharacterized LOC125961393

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064574.1 Chromosome 16 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
crooked neck-like protein 1
Names
crooked neck pre-mRNA splicing factor-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064574.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    46939421..46962474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004270418.4 → XP_004270466.2  crooked neck-like protein 1 isoform X1

    Related
    ENSOORP00010013537.1, ENSOORT00010015862.1

  2. XM_033429401.2 → XP_033285292.2  crooked neck-like protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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