U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TAPT1 transmembrane anterior posterior transformation 1 [ Orcinus orca (killer whale) ]

Gene ID: 101280444, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TAPT1
Gene description
transmembrane anterior posterior transformation 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TAPT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 4 NC_064562.1 (111362526..111427225)

Chromosome 4 - NC_064562.1Genomic Context describing neighboring genes Neighboring gene quinoid dihydropteridine reductase Neighboring gene LIM domain binding 2 Neighboring gene U6 spliceosomal RNA Neighboring gene prominin 1 Neighboring gene fibroblast growth factor binding protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_064562.1 Chromosome 4 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maintenance of protein localization in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transmembrane anterior posterior transformation protein 1 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064562.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    111362526..111427225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012537716.3 → XP_012393170.2  transmembrane anterior posterior transformation protein 1 homolog

    Conserved Domains (1) summary
    pfam05346
    Location:350 → 654
    DUF747; Eukaryotic membrane protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.