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TFPT TCF3 fusion partner [ Orcinus orca (killer whale) ]

Gene ID: 101275573, updated on 8-Mar-2024

Summary

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Gene symbol
TFPT
Gene description
TCF3 fusion partner
See related
EnsemblRapid:ENSOORG00010007644
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 20 NC_064578.1 (55128814..55135367, complement)

Chromosome 20 - NC_064578.1Genomic Context describing neighboring genes Neighboring gene V-set and transmembrane domain containing 1 Neighboring gene uncharacterized LOC117198725 Neighboring gene NADH:ubiquinone oxidoreductase subunit A3 Neighboring gene pre-mRNA processing factor 31 Neighboring gene CCR4-NOT transcription complex subunit 3 Neighboring gene leukocyte receptor cluster member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064578.1 Chromosome 20 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TCF3 fusion partner

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064578.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    55128814..55135367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004285679.3 → XP_004285727.1  TCF3 fusion partner isoform X2

    See identical proteins and their annotated locations for XP_004285727.1

    Related
    ENSOORP00010009403.1, ENSOORT00010011190.1

  2. XM_033416365.1 → XP_033272256.1  TCF3 fusion partner isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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