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ERG ETS transcription factor ERG [ Orcinus orca (killer whale) ]

Gene ID: 101272228, updated on 8-Mar-2024

Summary

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Gene symbol
ERG
Gene description
ETS transcription factor ERG
See related
EnsemblRapid:ENSOORG00010016155
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 5 NC_064563.1 (142297960..142578450, complement)

Chromosome 5 - NC_064563.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117199331 Neighboring gene uncharacterized LOC125964559 Neighboring gene potassium inwardly rectifying channel subfamily J member 15 Neighboring gene uncharacterized LOC125964385 Neighboring gene ETS proto-oncogene 2, transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064563.1 Chromosome 5 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional regulator ERG
Names
ERG, ETS transcription factor
v-ets erythroblastosis virus E26 oncogene homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064563.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    142297960..142578450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049709977.1 → XP_049565934.1  transcriptional regulator ERG isoform X1

    Related
    ENSOORP00010021081.1, ENSOORT00010024071.1

  2. XM_049709979.1 → XP_049565936.1  transcriptional regulator ERG isoform X5

  3. XM_049709978.1 → XP_049565935.1  transcriptional regulator ERG isoform X3

  4. XM_033418314.2 → XP_033274205.1  transcriptional regulator ERG isoform X6

    Conserved Domains (2) summary
    smart00413
    Location:259 → 342
    ETS; erythroblast transformation specific domain
    cl15755
    Location:115 → 198
    SAM_superfamily; SAM (Sterile alpha motif )

  5. XM_004264562.4 → XP_004264610.1  transcriptional regulator ERG isoform X4

    See identical proteins and their annotated locations for XP_004264610.1

    Related
    ENSOORP00010021077.1, ENSOORT00010024067.1
    Conserved Domains (2) summary
    cd08540
    Location:127 → 201
    SAM_PNT-ERG; Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor
    smart00413
    Location:286 → 369
    ETS; erythroblast transformation specific domain

  6. XM_004264561.3 → XP_004264609.1  transcriptional regulator ERG isoform X2

    See identical proteins and their annotated locations for XP_004264609.1

    Related
    ENSOORP00010021071.1, ENSOORT00010024060.1
    Conserved Domains (2) summary
    cd08540
    Location:127 → 201
    SAM_PNT-ERG; Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor
    smart00413
    Location:310 → 393
    ETS; erythroblast transformation specific domain
Nucleotide Protein
Heading Accession and Version

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