U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101265309 zinc finger protein ZAT5 [ Solanum lycopersicum (tomato) ]

Gene ID: 101265309, updated on 6-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101265309
Gene description
zinc finger protein ZAT5
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101265309 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 11 NC_015448.3 (52477500..52478798)
102 previous assembly SL2.50 (GCF_000188115.3) 11 NC_015448.2 (52183113..52184399)

Chromosome 11 - NC_015448.3Genomic Context describing neighboring genes Neighboring gene protein UPSTREAM OF FLC Neighboring gene superoxide dismutase [Cu-Zn], chloroplastic Neighboring gene 50S ribosomal protein L9, chloroplastic Neighboring gene protein SENSITIVE TO PROTON RHIZOTOXICITY 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein ZAT5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015448.3 Reference SL3.0 Primary Assembly

    Range
    52477500..52478798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004251321.4 → XP_004251369.1  zinc finger protein ZAT5

    UniProtKB/TrEMBL
    A0A3Q7IZ65
    Conserved Domains (1) summary
    pfam13912
    Location:135 → 161
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases