U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101222070 delta-1-pyrroline-5-carboxylate synthase [ Cucumis sativus (cucumber) ]

Gene ID: 101222070, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101222070
Gene description
delta-1-pyrroline-5-carboxylate synthase
Locus tag
Csa_002101
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101222070 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (29279299..29284495)
101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (27930776..27936031)

Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene PRA1 family protein A1 Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene transcription factor EMB1444 Neighboring gene tropinone reductase homolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate-5-semialdehyde dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proline biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
delta-1-pyrroline-5-carboxylate synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    29279299..29284495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011653581.2 → XP_011651883.1  delta-1-pyrroline-5-carboxylate synthase isoform X2

    See identical proteins and their annotated locations for XP_011651883.1

    UniProtKB/TrEMBL
    A0A0A0LAF9, A0A2D0UVX8
    Conserved Domains (3) summary
    cd07079
    Location:293 → 693
    ALDH_F18-19_ProA-GPR; Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19
    PLN02418
    Location:1 → 712
    PLN02418; delta-1-pyrroline-5-carboxylate synthase
    cd04256
    Location:4 → 278
    AAK_P5CS_ProBA; AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme ...

  2. XM_004137710.3 → XP_004137758.1  delta-1-pyrroline-5-carboxylate synthase isoform X1

    UniProtKB/TrEMBL
    A0A2D0UVX8
    Conserved Domains (1) summary
    PLN02418
    Location:1 → 715
    PLN02418; delta-1-pyrroline-5-carboxylate synthase

  3. XM_011653583.2 → XP_011651885.1  delta-1-pyrroline-5-carboxylate synthase isoform X3

    See identical proteins and their annotated locations for XP_011651885.1

    UniProtKB/TrEMBL
    A0A2D0UVX8
    Conserved Domains (3) summary
    cd07079
    Location:193 → 593
    ALDH_F18-19_ProA-GPR; Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19
    PLN02418
    Location:1 → 612
    PLN02418; delta-1-pyrroline-5-carboxylate synthase
    cl00452
    Location:1 → 178
    AAK; Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that ...

  4. XM_011653582.2 → XP_011651884.1  delta-1-pyrroline-5-carboxylate synthase isoform X3

    See identical proteins and their annotated locations for XP_011651884.1

    UniProtKB/TrEMBL
    A0A2D0UVX8
    Conserved Domains (3) summary
    cd07079
    Location:193 → 593
    ALDH_F18-19_ProA-GPR; Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19
    PLN02418
    Location:1 → 612
    PLN02418; delta-1-pyrroline-5-carboxylate synthase
    cl00452
    Location:1 → 178
    AAK; Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases