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LOC101212196 protein FAR1-RELATED SEQUENCE 7 [ Cucumis sativus (cucumber) ]

Gene ID: 101212196, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101212196
Gene description
protein FAR1-RELATED SEQUENCE 7
Locus tag
Csa_009968
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (10393536..10397502, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (10205494..10208757, complement)

Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene glutamine synthetase leaf isozyme, chloroplastic Neighboring gene membrane protein PM19L Neighboring gene BSD domain-containing protein C22A12.14c Neighboring gene S-adenosylmethionine decarboxylase proenzyme 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAR1-RELATED SEQUENCE 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    10393536..10397502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031883445.1 → XP_031739305.1  protein FAR1-RELATED SEQUENCE 7 isoform X2

    Conserved Domains (2) summary
    PLN03097
    Location:198 → 767
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
    cl40636
    Location:58 → 132
    FAR1; FAR1 DNA-binding domain

  2. XM_004134112.3 → XP_004134160.2  protein FAR1-RELATED SEQUENCE 7 isoform X1

    See identical proteins and their annotated locations for XP_004134160.2

    UniProtKB/TrEMBL
    A0A0A0L5P5
    Conserved Domains (2) summary
    PLN03097
    Location:210 → 779
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
    pfam03101
    Location:70 → 144
    FAR1; FAR1 DNA-binding domain
Nucleotide Protein
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