U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101206112 probable pectinesterase/pectinesterase inhibitor 25 [ Cucumis sativus (cucumber) ]

Gene ID: 101206112, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101206112
Gene description
probable pectinesterase/pectinesterase inhibitor 25
Locus tag
Csa_007825
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 5 NC_026659.2 (27748846..27754315)
101 previous assembly ASM407v2 (GCF_000004075.2) 5 NC_026659.1 (24031874..24037220)

Chromosome 5 - NC_026659.2Genomic Context describing neighboring genes Neighboring gene protein RBL Neighboring gene ethylene-responsive transcription factor WRI1 Neighboring gene inactive protein RESTRICTED TEV MOVEMENT 2-like Neighboring gene inactive protein RESTRICTED TEV MOVEMENT 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable pectinesterase/pectinesterase inhibitor 25

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026659.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    27748846..27754315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004135327.3 → XP_004135375.1  probable pectinesterase/pectinesterase inhibitor 25

    See identical proteins and their annotated locations for XP_004135375.1

    UniProtKB/TrEMBL
    A0A0A0KUN8
    Conserved Domains (1) summary
    PLN03043
    Location:24 → 563
    PLN03043; Probable pectinesterase/pectinesterase inhibitor; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases