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cep44 centrosomal protein 44 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101165949, updated on 8-Mar-2024

Summary

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Gene symbol
cep44
Gene description
centrosomal protein 44
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 1 NC_019859.2 (27428945..27436263, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 1 NC_019859.1 (27051541..27060096, complement)

Chromosome 1 - NC_019859.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101170325 Neighboring gene catenin (cadherin-associated protein), delta 1 Neighboring gene F-box protein 8 Neighboring gene uncharacterized LOC110015438

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 44 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019859.2 Reference ASM223467v1 Primary Assembly

    Range
    27428945..27436263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023959358.1 → XP_023815126.1  centrosomal protein of 44 kDa isoform X3

    UniProtKB/TrEMBL
    A0A3P9KCF0
    Conserved Domains (1) summary
    pfam15007
    Location:6 → 128
    CEP44; Centrosomal spindle body, CEP44

  2. XM_023959354.1 → XP_023815122.1  centrosomal protein of 44 kDa isoform X1

    UniProtKB/TrEMBL
    A0A3P9KCF0
    Conserved Domains (1) summary
    pfam15007
    Location:6 → 128
    CEP44; Centrosomal spindle body, CEP44

  3. XM_023959357.1 → XP_023815125.1  centrosomal protein of 44 kDa isoform X2

    UniProtKB/TrEMBL
    A0A3P9KCF0
    Conserved Domains (1) summary
    pfam15007
    Location:9 → 108
    CEP44; Centrosomal spindle body, CEP44

  4. XM_023959355.1 → XP_023815123.1  centrosomal protein of 44 kDa isoform X1

    UniProtKB/TrEMBL
    A0A3P9KCF0
    Conserved Domains (1) summary
    pfam15007
    Location:6 → 128
    CEP44; Centrosomal spindle body, CEP44

RNA

  1. XR_002874030.1 RNA Sequence

  2. XR_002874027.1 RNA Sequence

  3. XR_002874026.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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