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uhmk1 U2AF homology motif (UHM) kinase 1 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101158012, updated on 8-Mar-2024

Summary

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Gene symbol
uhmk1
Gene description
U2AF homology motif (UHM) kinase 1
See related
EnsemblRapid:ENSORLG00000014340
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See uhmk1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 4 NC_019862.2 (24933874..24941035)
102 previous assembly ASM31367v1 (GCF_000313675.1) 4 NC_019862.1 (26283365..26290314)

Chromosome 4 - NC_019862.2Genomic Context describing neighboring genes Neighboring gene membrane protein FAM159A Neighboring gene chromosome 4 C19orf44 homolog Neighboring gene aldo-keto reductase family 1, member A1b (aldehyde reductase) Neighboring gene meprin A subunit beta a Neighboring gene S100 calcium binding protein P

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoprotein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuronal ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase Kist
Names
U2AF homology motif kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019862.2 Reference ASM223467v1 Primary Assembly

    Range
    24933874..24941035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011474338.3 → XP_011472640.1  serine/threonine-protein kinase Kist

    UniProtKB/TrEMBL
    A0A3B3H5Q4, A0A3P9JX86
    Related
    ENSORLP00000026538.2, ENSORLT00000033186.2
    Conserved Domains (3) summary
    smart00220
    Location:48 → 328
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd12465
    Location:342 → 429
    RRM_UHMK1; RNA recognition motif found in U2AF homology motif kinase 1 (UHMK1) and similar proteins
    cl21453
    Location:47 → 332
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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