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cd36 CD36 molecule (CD36 blood group) [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101157502, updated on 8-Mar-2024

Summary

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Gene symbol
cd36
Gene description
CD36 molecule (CD36 blood group)
See related
EnsemblRapid:ENSORLG00000016066
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 23
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 23 NC_019881.2 (18320363..18329371)
102 previous assembly ASM31367v1 (GCF_000313675.1) 23 NC_019881.1 (18500634..18509652)

Chromosome 23 - NC_019881.2Genomic Context describing neighboring genes Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 2a Neighboring gene guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 Neighboring gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C Neighboring gene protein FAM180A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amyloid-beta clearance by cellular catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid storage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoprotein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in low-density lipoprotein particle clearance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in caveola IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet glycoprotein 4
Names
CD36 molecule (thrombospondin receptor)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019881.2 Reference ASM223467v1 Primary Assembly

    Range
    18320363..18329371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004083094.4 → XP_004083142.1  platelet glycoprotein 4

    UniProtKB/TrEMBL
    A0A3P9J583, H2MN10
    Related
    ENSORLP00000062624.1, ENSORLT00000056122.1
    Conserved Domains (1) summary
    pfam01130
    Location:17 → 451
    CD36; CD36 family
Nucleotide Protein
Heading Accession and Version

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