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SNX30 sorting nexin family member 30 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101151591, updated on 14-Mar-2024

Summary

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Gene symbol
SNX30
Gene description
sorting nexin family member 30
See related
Ensembl:ENSGGOG00000004212
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 13 NC_073237.2 (108969737..109113890)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 9 NC_073233.1 (109486286..109630388)

Chromosome 13 - NC_073237.2Genomic Context describing neighboring genes Neighboring gene KIAA1958 ortholog Neighboring gene uncharacterized LOC109028396 Neighboring gene INTS3 and NABP interacting protein Neighboring gene solute carrier family 46 member 2 Neighboring gene uncharacterized LOC129524560 Neighboring gene zinc finger protein 883 Neighboring gene ZFP37 zinc finger protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073237.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    108969737..109113890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055350427.2 → XP_055206402.2  sorting nexin-30 isoform X3

  2. XM_055350425.2 → XP_055206400.2  sorting nexin-30 isoform X1

  3. XM_004048452.5 → XP_004048500.1  sorting nexin-30 isoform X2

    See identical proteins and their annotated locations for XP_004048500.1

    UniProtKB/TrEMBL
    G3QNL2
    Related
    ENSGGOP00000004129.2
    Conserved Domains (2) summary
    cd06860
    Location:91 → 206
    PX_SNX7_30_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 7 and 30
    cd07667
    Location:190 → 429
    BAR_SNX30; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30

RNA

  1. XR_010130419.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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