CHL1 cell adhesion molecule L1 like [Gorilla gorilla gorilla (western lowland gorilla)] - Gene

Summary

Gene symbol: CHL1
Gene description: cell adhesion molecule L1 like
See related: Ensembl:ENSGGOG00000008679
Gene type: protein coding
RefSeq status: MODEL
Organism: Gorilla gorilla gorilla (sub-species: gorilla)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 31

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2)	2	NC_086017.1 (9992296..10201869)
RS_2023_04	previous assembly	NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1)	3	NC_073227.1 (10094477..10305808)

Chromosome 2 - NC_086017.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Homology

NCBI Orthologs

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables cell-cell adhesion mediator activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in axon guidance	IEA Inferred from Electronic Annotation more info	PubMed
involved_in brain development	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cell-cell adhesion	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in axon	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: neural cell adhesion molecule L1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

NC_086017.1 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Range

9992296..10201869

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_004033505.5 → XP_004033553.1 neural cell adhesion molecule L1-like protein isoform X1

UniProtKB/TrEMBL

G3R020

Related

ENSGGOP00000008495.3

Conserved Domains (8) summary

cd05845
Location:129 → 223

Ig2_L1-CAM_like; Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

cd00063
Location:628 → 717

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd00096
Location:457 → 524

Ig; Immunoglobulin domain

cd04978
Location:361 → 435

Ig4_L1-NrCAM_like; Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)

cd05731
Location:274 → 344

Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

pfam00041
Location:731 → 811

fn3; Fibronectin type III domain

pfam13882
Location:1121 → 1202

Bravo_FIGEY; Bravo-like intracellular region

cl11960
Location:53 → 126

Ig; Immunoglobulin domain
XM_031009568.3 → XP_030865428.1 neural cell adhesion molecule L1-like protein isoform X3

UniProtKB/TrEMBL

A0A2I2YIM2

Conserved Domains (8) summary

cd05845
Location:129 → 223

Ig2_L1-CAM_like; Second immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM) and similar proteins

cd00063
Location:628 → 717

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd00096
Location:457 → 524

Ig; Immunoglobulin domain

cd04978
Location:361 → 435

Ig4_L1-NrCAM_like; Fourth immunoglobulin (Ig)-like domain of L1, Ng-CAM (Neuron-glia CAM cell adhesion molecule), and NrCAM (Ng-CAM-related)

cd05731
Location:274 → 344

Ig3_L1-CAM_like; Third immunoglobulin (Ig)-like domain of the L1 cell adhesion molecule (CAM)

pfam00041
Location:731 → 811

fn3; Fibronectin type III domain

pfam13882
Location:1067 → 1148

Bravo_FIGEY; Bravo-like intracellular region

cl11960
Location:53 → 126

Ig; Immunoglobulin domain
XM_055380962.2 → XP_055236937.1 neural cell adhesion molecule L1-like protein isoform X3

UniProtKB/TrEMBL

A0A2I2YIM2
XM_055380956.2 → XP_055236931.1 neural cell adhesion molecule L1-like protein isoform X1

UniProtKB/TrEMBL

G3R020
XM_055380959.2 → XP_055236934.1 neural cell adhesion molecule L1-like protein isoform X1

UniProtKB/TrEMBL

G3R020
XM_055380957.2 → XP_055236932.1 neural cell adhesion molecule L1-like protein isoform X1

UniProtKB/TrEMBL

G3R020
XM_055380961.2 → XP_055236936.1 neural cell adhesion molecule L1-like protein isoform X2

UniProtKB/TrEMBL

G3RRD7
XM_063703557.1 → XP_063559627.1 neural cell adhesion molecule L1-like protein isoform X3

UniProtKB/TrEMBL

A0A2I2YIM2
XM_055380954.2 → XP_055236929.1 neural cell adhesion molecule L1-like protein isoform X1

UniProtKB/TrEMBL

G3R020
XM_055380955.2 → XP_055236930.1 neural cell adhesion molecule L1-like protein isoform X1

UniProtKB/TrEMBL

G3R020
XM_055380960.2 → XP_055236935.1 neural cell adhesion molecule L1-like protein isoform X1

UniProtKB/TrEMBL

G3R020