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HNRNPD heterogeneous nuclear ribonucleoprotein D [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101142971, updated on 14-Mar-2024

Summary

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Gene symbol
HNRNPD
Gene description
heterogeneous nuclear ribonucleoprotein D
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 3 NC_073227.2 (102639811..102662694, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 4 NC_073228.1 (95438083..95458104, complement)

Chromosome 3 - NC_073227.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134758334 Neighboring gene bridging integrator 2-like Neighboring gene uncharacterized LOC129533118 Neighboring gene immunoglobulin-binding protein 1-like Neighboring gene small nucleolar RNA SNORD42 Neighboring gene heterogeneous nuclear ribonucleoprotein D like Neighboring gene enolase-phosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein D0

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073227.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    102639811..102662694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063705366.1 → XP_063561436.1  heterogeneous nuclear ribonucleoprotein D0 isoform X4

  2. XM_031010075.3 → XP_030865935.1  heterogeneous nuclear ribonucleoprotein D0 isoform X2

    UniProtKB/TrEMBL
    G3SB22
    Conserved Domains (3) summary
    cd12583
    Location:164 → 238
    RRM2_hnRNPD; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
    pfam08143
    Location:60 → 78
    CBFNT; CBFNT (NUC161) domain
    cd12756
    Location:80 → 153
    RRM1_hnRNPD; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins

  3. XM_031010076.3 → XP_030865936.1  heterogeneous nuclear ribonucleoprotein D0 isoform X3

    Conserved Domains (3) summary
    cd12583
    Location:183 → 257
    RRM2_hnRNPD; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
    pfam08143
    Location:60 → 78
    CBFNT; CBFNT (NUC161) domain
    cd12756
    Location:99 → 172
    RRM1_hnRNPD; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins

  4. XM_031010074.3 → XP_030865934.1  heterogeneous nuclear ribonucleoprotein D0 isoform X1

    UniProtKB/TrEMBL
    G3SB22
    Conserved Domains (3) summary
    cd12583
    Location:183 → 257
    RRM2_hnRNPD; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
    pfam08143
    Location:60 → 78
    CBFNT; CBFNT (NUC161) domain
    cd12756
    Location:99 → 172
    RRM1_hnRNPD; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and similar proteins
Nucleotide Protein
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