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GOPC golgi associated PDZ and coiled-coil motif containing [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101136737, updated on 8-Mar-2024

Summary

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Gene symbol
GOPC
Gene description
golgi associated PDZ and coiled-coil motif containing
See related
Ensembl:ENSGGOG00000013555
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 5 NC_073229.2 (141749466..141792244, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 6 NC_073230.1 (141555717..141598768, complement)

Chromosome 5 - NC_073229.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene discoidin, CUB and LCCL domain containing 1 Neighboring gene nephrocan-like Neighboring gene uncharacterized LOC129534535

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi-associated PDZ and coiled-coil motif-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073229.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    141749466..141792244 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004044594.3 → XP_004044642.1  Golgi-associated PDZ and coiled-coil motif-containing protein isoform X2

    UniProtKB/TrEMBL
    A0A2I2ZRF7, A0A2I2ZRL0
    Related
    ENSGGOP00000049666.1
    Conserved Domains (2) summary
    cd00992
    Location:278 → 360
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam10186
    Location:79 → 236
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14

  2. XM_004044595.3 → XP_004044643.1  Golgi-associated PDZ and coiled-coil motif-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A2I2ZRF7, G3RCI9
    Related
    ENSGGOP00000013221.3
    Conserved Domains (2) summary
    cd00992
    Location:286 → 368
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR02169
    Location:34 → 249
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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