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TOX thymocyte selection associated high mobility group box [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101134368, updated on 3-Apr-2024

Summary

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Gene symbol
TOX
Gene description
thymocyte selection associated high mobility group box
See related
Ensembl:ENSGGOG00000012139
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 7 NC_073231.2 (61271493..61580993)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 8 NC_073232.1 (67157351..67466669)

Chromosome 7 - NC_073231.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129524280 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene atherin-like Neighboring gene U4 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene small ribosomal subunit protein eS26-like Neighboring gene neutral sphingomyelinase activation associated factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in leukocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thymocyte selection-associated high mobility group box protein TOX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073231.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    61271493..61580993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004047066.5 → XP_004047114.3  thymocyte selection-associated high mobility group box protein TOX isoform X1

    UniProtKB/TrEMBL
    G3R8X1
    Conserved Domains (2) summary
    COG5648
    Location:257 → 360
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd00084
    Location:261 → 310
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...

  2. XM_055349684.2 → XP_055205659.1  thymocyte selection-associated high mobility group box protein TOX isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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