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VAPB VAMP associated protein B and C [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101127517, updated on 8-Mar-2024

Summary

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Gene symbol
VAPB
Gene description
VAMP associated protein B and C
See related
Ensembl:ENSGGOG00000007802
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See VAPB in Genome Data Viewer
Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 21 NC_073245.2 (70665599..70721099)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 20 NC_073244.1 (69471288..69527382)

Chromosome 21 - NC_073245.2Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 1-like Neighboring gene ankyrin repeat domain 60 Neighboring gene RAB22A, member RAS oncogene family Neighboring gene APC down-regulated 1 like Neighboring gene uncharacterized LOC101129187

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FFAT motif binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum-plasma membrane tethering IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-associated membrane protein-associated protein B/C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073245.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    70665599..70721099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004062431.5 → XP_004062479.1  vesicle-associated membrane protein-associated protein B/C isoform X2

    See identical proteins and their annotated locations for XP_004062479.1

    UniProtKB/TrEMBL
    G3QXS1
    Related
    ENSGGOP00000007631.2
    Conserved Domains (1) summary
    pfam00635
    Location:8 → 111
    Motile_Sperm; MSP (Major sperm protein) domain

  2. XM_063702375.1 → XP_063558445.1  vesicle-associated membrane protein-associated protein B/C isoform X1

  3. XM_004062432.5 → XP_004062480.1  vesicle-associated membrane protein-associated protein B/C isoform X3

    See identical proteins and their annotated locations for XP_004062480.1

    UniProtKB/TrEMBL
    A0A2I2YJ68
    Related
    ENSGGOP00000034991.1
    Conserved Domains (1) summary
    pfam00635
    Location:8 → 90
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
Heading Accession and Version

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