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CADM2 cell adhesion molecule 2 [ Ovis aries (sheep) ]

Gene ID: 101120371, updated on 8-Mar-2024

Summary

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Gene symbol
CADM2
Gene description
cell adhesion molecule 2
See related
EnsemblRapid:ENSOARG00020002352
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 1 NC_056054.1 (153842363..155133805)

Chromosome 1 - NC_056054.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene uncharacterized LOC121816270 Neighboring gene olfactory receptor 6C2-like Neighboring gene palmitoyltransferase ZDHHC16-like Neighboring gene transfer RNA cysteine (anticodon ACA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056054.1 Chromosome 1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
cell adhesion molecule 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056054.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    153842363..155133805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042230370.2 → XP_042086304.1  cell adhesion molecule 2 isoform X1

    UniProtKB/TrEMBL
    A0A836AJE8
    Related
    ENSOARP00020003007.2, ENSOART00020003628.2
    Conserved Domains (4) summary
    smart00294
    Location:397 → 415
    4.1m; putative band 4.1 homologues' binding motif
    smart00408
    Location:249 → 312
    IGc2; Immunoglobulin C-2 Type
    cd00096
    Location:49 → 53
    Ig; Ig strand B [structural motif]
    cl11960
    Location:36 → 129
    Ig; Immunoglobulin domain

  2. XM_042230374.2 → XP_042086308.1  cell adhesion molecule 2 isoform X2

    UniProtKB/TrEMBL
    A0A836AJE8
    Related
    ENSOARP00020042134.1, ENSOART00020050273.1
    Conserved Domains (5) summary
    smart00294
    Location:357 → 375
    4.1m; putative band 4.1 homologues' binding motif
    smart00408
    Location:249 → 312
    IGc2; Immunoglobulin C-2 Type
    cd00096
    Location:251 → 260
    Ig; Ig strand B [structural motif]
    cd05884
    Location:129 → 232
    IgI_2_Necl-3; Second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3); member of the I-set of Ig superfamily domains
    cd07701
    Location:35 → 130
    IgV_1_Necl-3; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-3; member of the V-set of Ig superfamily (IgSF) domains

  3. XM_042230375.2 → XP_042086309.1  cell adhesion molecule 2 isoform X3

    UniProtKB/TrEMBL
    A0A836AJE8
    Related
    ENSOARP00020003014.2, ENSOART00020003636.2
    Conserved Domains (5) summary
    smart00294
    Location:348 → 366
    4.1m; putative band 4.1 homologues' binding motif
    smart00408
    Location:240 → 303
    IGc2; Immunoglobulin C-2 Type
    cd00096
    Location:242 → 251
    Ig; Ig strand B [structural motif]
    cd05884
    Location:120 → 223
    IgI_2_Necl-3; Second immunoglobulin (Ig)-like domain of nectin-like molecule-3 (Necl-3); member of the I-set of Ig superfamily domains
    cd07701
    Location:26 → 121
    IgV_1_Necl-3; First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-3; member of the V-set of Ig superfamily (IgSF) domains
Nucleotide Protein Strain
Heading Accession and Version

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