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SRRM1 serine and arginine repetitive matrix 1 [ Ovis aries (sheep) ]

Gene ID: 101116288, updated on 3-Apr-2024

Summary

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Gene symbol
SRRM1
Gene description
serine and arginine repetitive matrix 1
See related
EnsemblRapid:ENSOARG00020010009
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 2 NC_056055.1 (242008160..242036684, complement)

Chromosome 2 - NC_056055.1Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex subunit 3-like Neighboring gene uncharacterized LOC114112908 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene non-compact myelin associated protein Neighboring gene transfer RNA serine (anticodon GGA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056055.1 Chromosome 2 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine repetitive matrix protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056055.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    242008160..242036684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060410666.1 → XP_060266649.1  serine/arginine repetitive matrix protein 1 isoform X17

  2. XM_060410662.1 → XP_060266645.1  serine/arginine repetitive matrix protein 1 isoform X12

  3. XM_060410665.1 → XP_060266648.1  serine/arginine repetitive matrix protein 1 isoform X16

  4. XM_060410661.1 → XP_060266644.1  serine/arginine repetitive matrix protein 1 isoform X11

  5. XM_060410664.1 → XP_060266647.1  serine/arginine repetitive matrix protein 1 isoform X15

  6. XM_060410660.1 → XP_060266643.1  serine/arginine repetitive matrix protein 1 isoform X10

  7. XM_060410663.1 → XP_060266646.1  serine/arginine repetitive matrix protein 1 isoform X14

  8. XM_060410659.1 → XP_060266642.1  serine/arginine repetitive matrix protein 1 isoform X9

  9. XM_027965508.3 → XP_027821309.1  serine/arginine repetitive matrix protein 1 isoform X8

    UniProtKB/TrEMBL
    W5P8Z8

  10. XM_027965504.3 → XP_027821305.1  serine/arginine repetitive matrix protein 1 isoform X4

    UniProtKB/TrEMBL
    W5P8Z8

  11. XM_027965507.3 → XP_027821308.1  serine/arginine repetitive matrix protein 1 isoform X7

    UniProtKB/TrEMBL
    W5P8Z8
    Related
    ENSOARP00020012797.2, ENSOART00020015469.2

  12. XM_015093684.4 → XP_014949170.2  serine/arginine repetitive matrix protein 1 isoform X3

    UniProtKB/TrEMBL
    W5P8Z8
    Related
    ENSOARP00020012695.2, ENSOART00020015341.2

  13. XM_027965506.3 → XP_027821307.1  serine/arginine repetitive matrix protein 1 isoform X6

    UniProtKB/TrEMBL
    W5P8Z8

  14. XM_027965502.3 → XP_027821303.1  serine/arginine repetitive matrix protein 1 isoform X2

    UniProtKB/TrEMBL
    W5P8Z8

  15. XM_027965505.3 → XP_027821306.1  serine/arginine repetitive matrix protein 1 isoform X5

    UniProtKB/TrEMBL
    W5P8Z8

  16. XM_027965501.3 → XP_027821302.1  serine/arginine repetitive matrix protein 1 isoform X1

    UniProtKB/TrEMBL
    W5P8Z8

  17. XM_042244559.2 → XP_042100493.1  serine/arginine repetitive matrix protein 1 isoform X13

    UniProtKB/TrEMBL
    W5P8Z8
    Conserved Domains (2) summary
    smart00311
    Location:1 → 76
    PWI; domain in splicing factors
    PHA03247
    Location:579 → 779
    PHA03247; large tegument protein UL36; Provisional

  18. XM_027965514.3 → XP_027821315.1  serine/arginine repetitive matrix protein 1 isoform X18

    UniProtKB/TrEMBL
    W5P8Z8
    Related
    ENSOARP00020013007.2, ENSOART00020015728.2
Nucleotide Protein Strain
Heading Accession and Version

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