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CLDN6 claudin 6 [ Felis catus (domestic cat) ]

Gene ID: 101100433, updated on 8-Mar-2024

Summary

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Official Symbol
CLDN6
Official Full Name
claudin 6
Primary source
VGNC:VGNC:80560
See related
EnsemblRapid:ENSFCTG00005008130
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: E3
Exon count:
5
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E3 NC_058383.1 (38696907..38700553)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E3 NC_018738.3 (42122980..42126092)

Chromosome E3 - NC_058383.1Genomic Context describing neighboring genes Neighboring gene host cell factor C1 regulator 1 Neighboring gene TNF receptor superfamily member 12A Neighboring gene claudin 9 Neighboring gene glycine-rich cell wall structural protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058383.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    38696907..38700553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045047572.1 → XP_044903507.1  claudin-6 isoform X3

    UniProtKB/TrEMBL
    M3W2L0
    Related
    ENSFCTP00005014746.1, ENSFCTT00005022620.1
    Conserved Domains (1) summary
    cl21598
    Location:5 → 170
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_003998929.6 → XP_003998978.2  claudin-6 isoform X3

    UniProtKB/TrEMBL
    M3W2L0
    Related
    ENSFCTP00005014753.1, ENSFCTT00005022631.1
    Conserved Domains (1) summary
    cl21598
    Location:5 → 170
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  3. XM_045047574.1 → XP_044903509.1  claudin-6 isoform X5

    UniProtKB/TrEMBL
    M3W2L0

  4. XM_045047573.1 → XP_044903508.1  claudin-6 isoform X4

    UniProtKB/TrEMBL
    M3W2L0

  5. XM_045047570.1 → XP_044903505.1  claudin-6 isoform X1

    UniProtKB/TrEMBL
    M3W2L0

  6. XM_006942421.5 → XP_006942483.2  claudin-6 isoform X2

    UniProtKB/TrEMBL
    M3W2L0
    Related
    ENSFCTP00005014773.1, ENSFCTT00005022663.1
    Conserved Domains (1) summary
    cl21598
    Location:34 → 199
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  7. XM_019821089.3 → XP_019676648.2  claudin-6 isoform X3

    UniProtKB/TrEMBL
    M3W2L0
    Related
    ENSFCTP00005014743.1, ENSFCTT00005022614.1
    Conserved Domains (1) summary
    cl21598
    Location:5 → 170
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  8. XM_045047575.1 → XP_044903510.1  claudin-6 isoform X6

    UniProtKB/TrEMBL
    M3W2L0
Nucleotide Protein
Heading Accession and Version

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