PAAF1 proteasomal ATPase associated factor 1 [Felis catus (domestic cat)] - Gene

Summary

Gene symbol: PAAF1
Gene description: proteasomal ATPase associated factor 1
Gene type: protein coding
RefSeq status: MODEL
Organism: Felis catus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs: human all
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Genomic context

Location:: chromosome: D1

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
105	current	F.catus_Fca126_mat1.0 (GCF_018350175.1)	D1	NC_058377.1 (58029474..58067037, complement)
104	previous assembly	Felis_catus_9.0 (GCF_000181335.3)	D1	NC_018732.3 (59996356..60034940, complement)

Chromosome D1 - NC_058377.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: proteasomal ATPase-associated factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

NC_058377.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

Range

58029474..58067037 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_045038762.1 → XP_044894697.1 proteasomal ATPase-associated factor 1 isoform X2

UniProtKB/TrEMBL

A0A5F5XQ11

Conserved Domains (2) summary

sd00039
Location:138 → 174

7WD40; WD40 repeat [structural motif]

cl29593
Location:91 → 235

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_045038763.1 → XP_044894698.1 proteasomal ATPase-associated factor 1 isoform X3

UniProtKB/TrEMBL

A0A5F5XVE6, M3XF67

Conserved Domains (2) summary

sd00039
Location:108 → 144

7WD40; WD40 repeat [structural motif]

cl29593
Location:63 → 308

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_003992737.5 → XP_003992786.1 proteasomal ATPase-associated factor 1 isoform X1

UniProtKB/TrEMBL

A0A2I2UZY0, M3XF67

Conserved Domains (3) summary

COG2319
Location:57 → 392

WD40; WD40 repeat [General function prediction only]

sd00039
Location:138 → 174

7WD40; WD40 repeat [structural motif]

cl02567
Location:89 → 338

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_006936950.4 → XP_006937012.1 proteasomal ATPase-associated factor 1 isoform X4

Conserved Domains (3) summary

COG2319
Location:29 → 309

WD40; WD40 repeat [General function prediction only]

sd00039
Location:55 → 91

7WD40; WD40 repeat [structural motif]

cl02567
Location:10 → 255

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...