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TMTC2 transmembrane O-mannosyltransferase targeting cadherins 2 [ Felis catus (domestic cat) ]

Gene ID: 101094358, updated on 8-Mar-2024

Summary

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Gene symbol
TMTC2
Gene description
transmembrane O-mannosyltransferase targeting cadherins 2
See related
EnsemblRapid:ENSFCTG00005012132
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B4
Exon count:
13
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B4 NC_058374.1 (105543508..105948255)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B4 NC_018729.3 (107774249..108178877)

Chromosome B4 - NC_058374.1Genomic Context describing neighboring genes Neighboring gene methyltransferase like 25 Neighboring gene 60S ribosomal protein L6-like Neighboring gene uncharacterized LOC109501694 Neighboring gene uncharacterized LOC111561398 Neighboring gene U12 minor spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene transcription factor BTF3-like Neighboring gene uncharacterized LOC123386663 Neighboring gene uncharacterized LOC123386664

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC2
Names
transmembrane and tetratricopeptide repeat containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058374.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    105543508..105948255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019835295.3 → XP_019690854.1  protein O-mannosyl-transferase TMTC2 isoform X2

    Related
    ENSFCTP00005023443.1, ENSFCTT00005034430.1
    Conserved Domains (3) summary
    COG0457
    Location:481 → 722
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:527 → 555
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:248 → 318
    DUF1736; Domain of unknown function (DUF1736)

  2. XM_023257281.2 → XP_023113049.1  protein O-mannosyl-transferase TMTC2 isoform X1

    UniProtKB/TrEMBL
    M3X733
    Related
    ENSFCTP00005023627.1, ENSFCTT00005034644.1
    Conserved Domains (4) summary
    COG0457
    Location:481 → 722
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG5010
    Location:643 → 823
    TadD; Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]
    sd00006
    Location:527 → 555
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:248 → 318
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

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