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CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component [ Felis catus (domestic cat) ]

Gene ID: 101093139, updated on 8-Mar-2024

Summary

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Official Symbol
CTR9
Official Full Name
CTR9 homolog, Paf1/RNA polymerase II complex component
Primary source
VGNC:VGNC:61262
See related
EnsemblRapid:ENSFCTG00005016576
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: D1
Exon count:
25
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D1 NC_058377.1 (67266186..67294398)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D1 NC_018732.3 (69201887..69229868)

Chromosome D1 - NC_058377.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109491996 Neighboring gene inositol 1,4,5-triphosphate receptor associated 1 Neighboring gene 60S ribosomal protein L30-like Neighboring gene uncharacterized LOC109492346 Neighboring gene small nucleolar RNA SNORD97 Neighboring gene eukaryotic translation initiation factor 4 gamma 2 Neighboring gene zinc finger BED-type containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase-associated protein CTR9 homolog
Names
Ctr9, Paf1/RNA polymerase II complex component, homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058377.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    67266186..67294398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011286715.4 → XP_011285017.1  RNA polymerase-associated protein CTR9 homolog

    See identical proteins and their annotated locations for XP_011285017.1

    UniProtKB/TrEMBL
    M3VUP9
    Related
    ENSFCTP00005034172.1, ENSFCTT00005047481.1
    Conserved Domains (3) summary
    TIGR02917
    Location:110 → 781
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:501 → 525
    TPR; TPR repeat [structural motif]
    NF033609
    Location:1024 → 1173
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
Nucleotide Protein
Heading Accession and Version

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