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CLMN calmin [ Felis catus (domestic cat) ]

Gene ID: 101089701, updated on 8-Mar-2024

Summary

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Official Symbol
CLMN
Official Full Name
calmin
Primary source
VGNC:VGNC:60966
See related
EnsemblRapid:ENSFCTG00005010939
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B3
Exon count:
13
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B3 NC_058373.1 (137735963..137849192, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B3 NC_018728.3 (140312237..140426066, complement)

Chromosome B3 - NC_058373.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102900584 Neighboring gene dicer 1, ribonuclease III Neighboring gene uncharacterized LOC123386196 Neighboring gene uncharacterized LOC123386195 Neighboring gene uncharacterized LOC109501007 Neighboring gene uncharacterized LOC102900718

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of meiotic nuclear membrane microtubule tethering complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: calmin
Names
calmin (calponin-like, transmembrane)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058373.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    137735963..137849192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023256004.2 → XP_023111772.2  LOW QUALITY PROTEIN: calmin

    UniProtKB/TrEMBL
    M3WGB7
    Related
    ENSFCTP00005020121.1, ENSFCTT00005030687.1
    Conserved Domains (3) summary
    PHA03307
    Location:573 → 874
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5069
    Location:26 → 297
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    PRK13108
    Location:553 → 676
    PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
Nucleotide Protein
Heading Accession and Version

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