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MATN4 matrilin 4 [ Felis catus (domestic cat) ]

Gene ID: 101088918, updated on 8-Mar-2024

Summary

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Official Symbol
MATN4
Official Full Name
matrilin 4
Primary source
VGNC:VGNC:68197
See related
EnsemblRapid:ENSFCTG00005027947
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See MATN4 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
12
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A3 NC_058370.1 (15532197..15545074)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A3 NC_018725.3 (15763139..15776762)

Chromosome A3 - NC_058370.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene syndecan 4 Neighboring gene recombination signal binding protein for immunoglobulin kappa J region like Neighboring gene uncharacterized LOC109498553 Neighboring gene secretory leukocyte peptidase inhibitor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrilin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058370.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    15532197..15545074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023251205.2 → XP_023106973.2  matrilin-4 isoform X2

    UniProtKB/TrEMBL
    A0A5F5XQG8
    Related
    ENSFCTP00005055149.1, ENSFCTT00005079006.1
    Conserved Domains (3) summary
    smart00179
    Location:259 → 297
    EGF_CA; Calcium-binding EGF-like domain
    cd01475
    Location:33 → 255
    vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
    cl00057
    Location:385 → 571
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_023251204.2 → XP_023106972.2  matrilin-4 isoform X1

    UniProtKB/TrEMBL
    M3WC64
    Related
    ENSFCTP00005055250.1, ENSFCTT00005079174.1
    Conserved Domains (3) summary
    smart00179
    Location:259 → 297
    EGF_CA; Calcium-binding EGF-like domain
    cd01475
    Location:33 → 255
    vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
    cl00057
    Location:385 → 621
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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