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TMEM53 transmembrane protein 53 [ Felis catus (domestic cat) ]

Gene ID: 101086915, updated on 8-Mar-2024

Summary

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Official Symbol
TMEM53
Official Full Name
transmembrane protein 53
Primary source
VGNC:VGNC:66351
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See TMEM53 in Genome Data Viewer
Location:
chromosome: C1
Exon count:
6
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) C1 NC_058375.1 (35137314..35171638, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) C1 NC_018730.3 (35373961..35394434, complement)

Chromosome C1 - NC_058375.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 220 Neighboring gene uncharacterized LOC109502279 Neighboring gene U6 spliceosomal RNA Neighboring gene armadillo like helical domain containing 1 Neighboring gene uncharacterized LOC123379588 Neighboring gene U5 spliceosomal RNA Neighboring gene kinesin family member 2C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058375.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    35137314..35171638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011284662.4 → XP_011282964.1  transmembrane protein 53 isoform X2

    Conserved Domains (1) summary
    pfam05705
    Location:35 → 247
    DUF829; Eukaryotic protein of unknown function (DUF829)

  2. XM_003990016.6 → XP_003990065.3  transmembrane protein 53 isoform X1

    UniProtKB/TrEMBL
    M3W7G4
    Conserved Domains (1) summary
    pfam05705
    Location:36 → 272
    DUF829; Eukaryotic protein of unknown function (DUF829)
Nucleotide Protein
Heading Accession and Version

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