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RABEPK Rab9 effector protein with kelch motifs [ Felis catus (domestic cat) ]

Gene ID: 101083217, updated on 8-Mar-2024

Summary

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Official Symbol
RABEPK
Official Full Name
Rab9 effector protein with kelch motifs
Primary source
VGNC:VGNC:64475
See related
EnsemblRapid:ENSFCTG00005025670
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: D4
Exon count:
10
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D4 NC_058380.1 (83998415..84029960)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D4 NC_018735.3 (86182313..86208434)

Chromosome D4 - NC_058380.1Genomic Context describing neighboring genes Neighboring gene suppressor of cancer cell invasion Neighboring gene uncharacterized LOC111557543 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like Neighboring gene protein phosphatase 6 catalytic subunit Neighboring gene uncharacterized LOC123381587 Neighboring gene hypoxanthine phosphoribosyltransferase 1 Neighboring gene heat shock protein family A (Hsp70) member 5 Neighboring gene GTPase activating protein and VPS9 domains 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab9 effector protein with kelch motifs

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058380.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    83998415..84029960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006939461.5 → XP_006939523.1  rab9 effector protein with kelch motifs isoform X1

    See identical proteins and their annotated locations for XP_006939523.1

    UniProtKB/TrEMBL
    A0A337RV10
    Conserved Domains (3) summary
    sd00038
    Location:86 → 135
    Kelch; KELCH repeat [structural motif]
    pfam13415
    Location:252 → 301
    Kelch_3; Galactose oxidase, central domain
    cl26061
    Location:9 → 269
    PLN02193; nitrile-specifier protein

  2. XM_019816515.3 → XP_019672074.1  rab9 effector protein with kelch motifs isoform X3

    UniProtKB/TrEMBL
    A0A337RV10
    Conserved Domains (3) summary
    sd00038
    Location:19 → 68
    Kelch; KELCH repeat [structural motif]
    pfam13415
    Location:185 → 234
    Kelch_3; Galactose oxidase, central domain
    cl26061
    Location:2 → 202
    PLN02193; nitrile-specifier protein

  3. XM_045043112.1 → XP_044899047.1  rab9 effector protein with kelch motifs isoform X2

    UniProtKB/TrEMBL
    A0A337RV10
    Conserved Domains (3) summary
    smart00612
    Location:274 → 321
    Kelch; Kelch domain
    PLN02193
    Location:45 → 289
    PLN02193; nitrile-specifier protein
    sd00038
    Location:106 → 155
    Kelch; KELCH repeat [structural motif]

  4. XM_006939460.4 → XP_006939522.1  rab9 effector protein with kelch motifs isoform X1

    See identical proteins and their annotated locations for XP_006939522.1

    UniProtKB/TrEMBL
    A0A337RV10
    Related
    ENSFCTP00005051536.1, ENSFCTT00005072825.1
    Conserved Domains (3) summary
    sd00038
    Location:86 → 135
    Kelch; KELCH repeat [structural motif]
    pfam13415
    Location:252 → 301
    Kelch_3; Galactose oxidase, central domain
    cl26061
    Location:9 → 269
    PLN02193; nitrile-specifier protein

  5. XM_019816513.3 → XP_019672072.1  rab9 effector protein with kelch motifs isoform X1

    UniProtKB/TrEMBL
    A0A337RV10
    Conserved Domains (3) summary
    sd00038
    Location:86 → 135
    Kelch; KELCH repeat [structural motif]
    pfam13415
    Location:252 → 301
    Kelch_3; Galactose oxidase, central domain
    cl26061
    Location:9 → 269
    PLN02193; nitrile-specifier protein
Nucleotide Protein
Heading Accession and Version

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