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rbm19 RNA binding motif protein 19 [ Takifugu rubripes (torafugu) ]

Gene ID: 101079098, updated on 8-Mar-2024

Summary

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Gene symbol
rbm19
Gene description
RNA binding motif protein 19
See related
Ensembl:ENSTRUG00000016032
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
24
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 21 NC_042305.1 (13920991..13926793)
101 previous assembly FUGU5 (GCF_000180615.1) 21 NC_018910.1 (9772101..9777880)

Chromosome 21 - NC_042305.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101078644 Neighboring gene microRNA mir-22b Neighboring gene solute carrier family 2 member 11b Neighboring gene phospholipase B domain containing 2 Neighboring gene transmembrane protein 248-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable RNA-binding protein 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042305.1 Reference fTakRub1.2 Primary Assembly

    Range
    13920991..13926793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011615772.2 → XP_011614074.2  probable RNA-binding protein 19

    UniProtKB/TrEMBL
    H2UVM3
    Related
    ENSTRUP00000041001.3, ENSTRUT00000041144.3
    Conserved Domains (7) summary
    COG0724
    Location:493 → 782
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12318
    Location:716 → 795
    RRM5_RBM19_like; RNA recognition motif 5 in RNA-binding protein 19 (RBM19 or RBD-1) and similar proteins
    cd12564
    Location:2 → 77
    RRM1_RBM19; RNA recognition motif 1 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12567
    Location:413 → 491
    RRM3_RBM19; RNA recognition motif 3 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12569
    Location:602 → 673
    RRM4_RBM19; RNA recognition motif 4 in RNA-binding protein 19 (RBM19) and similar proteins
    cd12571
    Location:818 → 896
    RRM6_RBM19; RNA recognition motif 6 in RNA-binding protein 19 (RBM19) and similar proteins
    cl17169
    Location:306 → 377
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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