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hfm1 helicase for meiosis 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101077746, updated on 8-Mar-2024

Summary

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Gene symbol
hfm1
Gene description
helicase for meiosis 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See hfm1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
42
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 22 NC_042306.1 (11651614..11662472, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 22 NC_018911.1 (9125979..9136683, complement)

Chromosome 22 - NC_042306.1Genomic Context describing neighboring genes Neighboring gene glomulin, FKBP associated protein a Neighboring gene cell division cycle 7 homolog (S. cerevisiae) Neighboring gene zinc finger protein 644a Neighboring gene zinc finger protein 326 Neighboring gene leucine rich repeat containing 8 VRAC subunit Da

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent DNA helicase HFM1
Names
HFM1, ATP dependent DNA helicase homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042306.1 Reference fTakRub1.2 Primary Assembly

    Range
    11651614..11662472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029830792.1 → XP_029686652.1  probable ATP-dependent DNA helicase HFM1 isoform X3

    Conserved Domains (1) summary
    COG1204
    Location:274 → 1035
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]

  2. XM_029830791.1 → XP_029686651.1  probable ATP-dependent DNA helicase HFM1 isoform X2

  3. XM_029830790.1 → XP_029686650.1  probable ATP-dependent DNA helicase HFM1 isoform X1

  4. XM_029830796.1 → XP_029686656.1  probable ATP-dependent DNA helicase HFM1 isoform X4

  5. XM_029830795.1 → XP_029686655.1  probable ATP-dependent DNA helicase HFM1 isoform X4

  6. XM_029830793.1 → XP_029686653.1  probable ATP-dependent DNA helicase HFM1 isoform X4

    Conserved Domains (1) summary
    COG1204
    Location:284 → 1030
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]

  7. XM_029830794.1 → XP_029686654.1  probable ATP-dependent DNA helicase HFM1 isoform X4

    Conserved Domains (1) summary
    COG1204
    Location:284 → 1030
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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