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tmco3 transmembrane and coiled-coil domains 3 [ Takifugu rubripes (torafugu) ]

Gene ID: 101076283, updated on 8-Mar-2024

Summary

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Gene symbol
tmco3
Gene description
transmembrane and coiled-coil domains 3
See related
Ensembl:ENSTRUG00000017217
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 13 NC_042297.1 (16729059..16735403)
101 previous assembly FUGU5 (GCF_000180615.1) 13 NC_018902.1 (12944114..12949786)

Chromosome 13 - NC_042297.1Genomic Context describing neighboring genes Neighboring gene growth hormone regulated TBC protein 1a Neighboring gene ADP-ribosylhydrolase like 1 Neighboring gene DCN1, defective in cullin neddylation 1, domain containing 2b Neighboring gene G protein-coupled receptor kinase 1 a Neighboring gene transmembrane protein 255B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables potassium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and coiled-coil domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042297.1 Reference fTakRub1.2 Primary Assembly

    Range
    16729059..16735403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011610100.2 → XP_011608402.2  transmembrane and coiled-coil domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3B5KUU5, H2V4I1
    Related
    ENSTRUP00000057002.2, ENSTRUT00000056424.2
    Conserved Domains (2) summary
    pfam00999
    Location:282 → 649
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    pfam15905
    Location:100 → 241
    HMMR_N; Hyaluronan mediated motility receptor N-terminal

  2. XM_029846164.1 → XP_029702024.1  transmembrane and coiled-coil domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    H2V4I1
    Related
    ENSTRUP00000044115.3, ENSTRUT00000044263.3
    Conserved Domains (2) summary
    pfam00999
    Location:272 → 639
    Na_H_Exchanger; Sodium/hydrogen exchanger family
    pfam15905
    Location:90 → 231
    HMMR_N; Hyaluronan mediated motility receptor N-terminal
Nucleotide Protein
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