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epg5 ectopic P-granules autophagy protein 5 homolog (C. elegans) [ Takifugu rubripes (torafugu) ]

Gene ID: 101076221, updated on 8-Mar-2024

Summary

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Gene symbol
epg5
Gene description
ectopic P-granules autophagy protein 5 homolog (C. elegans)
See related
Ensembl:ENSTRUG00000011643
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
45
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 21 NC_042305.1 (17307809..17323108, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 21 NC_018910.1 (12926870..12942066, complement)

Chromosome 21 - NC_042305.1Genomic Context describing neighboring genes Neighboring gene aldo-keto reductase family 1, member A1a (aldehyde reductase) Neighboring gene DnaJ heat shock protein family (Hsp40) member B5 Neighboring gene protein limb expression 1 Neighboring gene RIO kinase 2 (yeast)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ectopic P granules protein 5 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042305.1 Reference fTakRub1.2 Primary Assembly

    Range
    17307809..17323108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011615886.2 → XP_011614188.2  ectopic P granules protein 5 homolog

    UniProtKB/TrEMBL
    H2TXM1
    Related
    ENSTRUP00000029430.3, ENSTRUT00000029547.3
Nucleotide Protein
Heading Accession and Version

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