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pacs2 phosphofurin acidic cluster sorting protein 2 [ Takifugu rubripes (torafugu) ]

Gene ID: 101075799, updated on 8-Mar-2024

Summary

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Gene symbol
pacs2
Gene description
phosphofurin acidic cluster sorting protein 2
See related
Ensembl:ENSTRUG00000010740
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
26
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 2 NC_042286.1 (3541568..3559730, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 2 NC_018891.1 (2386731..2404701, complement)

Chromosome 2 - NC_042286.1Genomic Context describing neighboring genes Neighboring gene actinin, alpha 1 Neighboring gene ddb1 and cul4 associated factor 5 Neighboring gene deubiquitinase DESI2-like Neighboring gene serine and arginine rich splicing factor 5a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphofurin acidic cluster sorting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042286.1 Reference fTakRub1.2 Primary Assembly

    Range
    3541568..3559730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029829515.1 → XP_029685375.1  phosphofurin acidic cluster sorting protein 2 isoform X3

    UniProtKB/TrEMBL
    H2TQZ0
    Conserved Domains (2) summary
    pfam10254
    Location:464 → 901
    Pacs-1; PACS-1 cytosolic sorting protein
    pfam10486
    Location:261 → 445
    PI3K_1B_p101; Phosphoinositide 3-kinase gamma adapter protein p101 subunit

  2. XM_029829509.1 → XP_029685369.1  phosphofurin acidic cluster sorting protein 2 isoform X2

    UniProtKB/TrEMBL
    H2TQZ0
    Conserved Domains (2) summary
    pfam10254
    Location:465 → 901
    Pacs-1; PACS-1 cytosolic sorting protein
    pfam10486
    Location:262 → 446
    PI3K_1B_p101; Phosphoinositide 3-kinase gamma adapter protein p101 subunit

  3. XM_029829503.1 → XP_029685363.1  phosphofurin acidic cluster sorting protein 2 isoform X1

    UniProtKB/TrEMBL
    H2TQZ0
    Conserved Domains (2) summary
    pfam10254
    Location:465 → 902
    Pacs-1; PACS-1 cytosolic sorting protein
    pfam10486
    Location:262 → 446
    PI3K_1B_p101; Phosphoinositide 3-kinase gamma adapter protein p101 subunit

  4. XM_029829520.1 → XP_029685380.1  phosphofurin acidic cluster sorting protein 2 isoform X4

    UniProtKB/TrEMBL
    H2TQZ0
    Conserved Domains (1) summary
    pfam10254
    Location:465 → 891
    Pacs-1; PACS-1 cytosolic sorting protein

  5. XM_011614911.2 → XP_011613213.1  phosphofurin acidic cluster sorting protein 2 isoform X5

    UniProtKB/TrEMBL
    H2TQZ0
    Conserved Domains (2) summary
    pfam10254
    Location:465 → 887
    Pacs-1; PACS-1 cytosolic sorting protein
    pfam10486
    Location:262 → 446
    PI3K_1B_p101; Phosphoinositide 3-kinase gamma adapter protein p101 subunit

  6. XM_003962342.3 → XP_003962391.1  phosphofurin acidic cluster sorting protein 2 isoform X6

    UniProtKB/TrEMBL
    H2TQZ0
    Related
    ENSTRUP00000027097.3, ENSTRUT00000027206.3
    Conserved Domains (2) summary
    pfam10254
    Location:465 → 876
    Pacs-1; PACS-1 cytosolic sorting protein
    pfam10486
    Location:262 → 446
    PI3K_1B_p101; Phosphoinositide 3-kinase gamma adapter protein p101 subunit
Nucleotide Protein
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